Central Research Laboratory (Department of Biochemistry)

About Us

Central Research Laboratory (CRL) was started in 2012 to provide centralized research infrastructure for the benefit of investigators across multiple disciplines at Sri Manakula Vinayagar Medical College and Hospital (SMVMCH). CRL is located on the first floor of the college building in the Department of Biochemistry.

CRL supports PG & UG students, faculties and PhD scholars, for their research activities by providing technical assistance and access to advanced scientific instruments. The research may be in the form of undergraduate research projects, postgraduate dissertation work, PhD thesis work and faculty research projects. In addition, CRL organizes training programmes, workshops/seminars and CME’s for students, faculties and research scholars in the focused areas of research.

clr_2024

The laboratory holds facility for DNA, RNA and protein isolation and analysis with the support of necessary equipment, such as Thermal cycler (PCR), electrophoresis units, ultra-centrifuge, water bath, spectrophotometer, multi-well plate reader and HPLC. This could facilitates molecular biology research at CRL for diagnostic purposes like dengue serotype identification, genotyping of scrub typhus pathogen, surveillance of hepatitis surface antigen, confirmation of genetic disorders such as Prolidase deficiency, and cardiovascular diseases associated with gene polymorphisms and continue to support related works across various areas of medical research.

Faculty & Staff

Administrative control Dr. P Sanjay, MDS, DNB
MOMSRCPS (Glasgow)
Dean Research
Professor & Head
Department of Dentistry, SMVMCH
Dr. M. Jeyakumar, MD
Professor & Head
Department of Biochemistry, SMVMCH
Dr. G. Muthu, Ph.D,
Laboratory Supervisor & Senior Scientist
Central Research Laboratory
Department of Biochemistry, SMVMCH
Faculty Dr. Tresa Remya A T, Ph.D,
Research Scientist
Central Research Laboratory
Department of Biochemistry, SMVMCH
Ms. B. Shalini M.Sc.
Research Assistant
Central Research Laboratory
Department of Biochemistry, SMVMCH
Staff Mrs. J. Anusuya DMLT
Lab Technician
Central Research Laboratory
Department of Biochemistry, SMVMCH

Facilities

Sample storage

CRL provides -20°C deep freezer facility to store samples of undergraduate, postgraduate and faculty research work

Type of sample
  • Plasma
  • Urine
  • Breast Milk
  • DNA
  • Saliva
  • Buffy coat
  • Whole blood
  • Tissue
Guidelines to use sample storage facility
  • UG/PG Students and Faculty are requested to receive permission from the Head of the Department of Biochemistry and Research Scientist of Central Research Laboratory through the concerned department of the investigator as follows
  • Provide a letter through the guide or PI of the concerned department to HOD Biochemistry mentioning the project title, sample type, storage temperature and duration.
  • Fill and submit the sample storage form of the CRL.
  • The completed project samples and kits will be stored for a maximum period of 1 year from the date of project completion in the storage facility of Central Research Laboratory, provided if space is available. They will be either discarded or used for CRL research activities after obtaining permission through proper channel.
List of instruments
No. NAME OF THE INSTRUMENT ID/Sl. No
1. (HPLC) 1220 Infinity LC DECAE00153
2. Gel Documentation System UVTS101116001
3. ELISA reader 18346
4. ELISA washer 512501024IE
5. Thermal cycler (labnet) BYQ6052A157
6. Gradient thermal cycler (Bio-Rad T100) 621BR28525
7. Cooling Centrifuge VCCJ-3320
8. Research Centrifuge VCCL-3475
9. Electrophoresis apparatus 30017474
10. UV/VIS Spectrophotometer 126560
11. BOD Incubator 0782
12. Incubator 0780/NA
13. -20°C Deep Freezer 100128CHF200B0073
14. Magnetic Stirrer with Hot plate NA/4055
15. pH Meter NA/CRL/PH-01
16. Refrigerator (Samsung) 00594ZAY201071T
17. Refrigerator (Whirlpool) INA133907404
18. Bench top centrifuge NA/IBLC-8065
19. Centrifuge NA/KDLC-12649
20. Centrifuge NA/KDLC-12654
21. Microwave Oven
22. Water bath NA/02-1556
23. Mini centrifuge (Eppendorf) NA/R235
24. Microfuge (PCR tubes) NA/S320
25. Vortexer NA/7192
Instrument Images with name

BOD Incubator
BOD Incubator

Cooling centrifuge

ELISA Reader

PCR (Gradient thermal cycler)

HPLC

Incubator

Gel documentation system

Gel electrophoresis unit

Spectrophotometer

PCR (Conventional Thermal cycler)

Maintenance of instruments
  • Installation of the instrument followed by periodical calibration of the instrument as per the standard guidelines.
  • Documentation of instruments user manuals and troubleshooting requirements.
  • Upon any technical issue, the biomedical group of SMVMCH will be contacted for necessary action.
  • Annual maintenance contract will be done for each instrument.
  • Logbooks for the instruments are maintained in the laboratory.

Research

Research interests
  • Genetic Polymorphism studies
  • Molecular Taxonomy
  • Clinical Microbiology
  • Biochemical Studies
Molecular and analytical techniques
  • Isolation of DNA from blood
  • Isolation of DNA from bacterial culture
  • Electrophoretic Techniques
  • Enzyme Linked Immuno Sorbent Assay (ELISA)
  • Polymerase Chain Reaction (PCR)
  • Restriction Fragmented Length Polymorphism (RFLP)
  • High Performance Liquid Chromatography (HPLC)
  • Spectrophotometric analysis
Joining research at CRL

1. Collaborative Research

  • The Principle Investigator (PI) is requested to discuss the project concept and expected collaboration from CRL with HOD, Biochemistry to ensure the feasibility to use CRL facility and faculty support.
  • PI should officially forward a letter through the parent department to HOD Biochemistry to conduct research at CRL through proper channel.

2. Utilization of the CRL Instruments for Research purpose

  • UG/PG students and faculty should forward letter through the parent department to HOD Biochemistry to obtain permission to use CRL instruments.
  • The instruments will be permitted to be operated by the user with the help of concerned person in CRL.
  • Data generated will be documented by Research Assistant and approved by Research Scientist at CRL and HOD, Biochemistry.
List of ongoing projects
Sl. No Project Title PI Co- PI Year of ethical approval
1. Study of Prognostic value of Interleukin-6 levels in sepsis patients Dr. M. Anil Kumar (PG) Dept. of General Medicine Dr. I. S. S. Suman Babu Dept. of General Medicine 04.03.2024
2. A study on correlation of urinary liver type fatty acid binding protein (L-FABP) as early biomarker of acute kidney injury Dr. Atul Vaisakh Kochan Vijayan (PG) Dept. of General Medicine Prof. Dr. M.K. Uthaya Sankar Dept. of General Medicine Dr. Ravikumar Dept. of Nephrology 04.03.2024
3. A study on the clinical significance of serum Interleukin-6 in heart failure patients Dr. Harikrishnan G.R. (PG) Dept. of General Medicine Prof. Dr. A.K. Badrinath Dept. of General Medicine 10.04.2023
4. Study of correlation of stroke prediction scores in heart failure with reduced ejection fraction patients without atrial fibrillation Dr. P. Ragavi (PG) Dept. of General Medicine Prof. Dr. A.K. Badrinath Dept. of General Medicine 10.04.2023
5. Comparing urine Trypsinogen activating peptide with C-reactive protein, serum amylase in assessing the severity of acute alcoholic pancreatitis Dr. T. Shobana (PG) Dept. of General Medicine Prof. Dr. C. Manokaran Dept. of General Medicine 10.04.2023
6. Correlation between IL-6 and the angiographic severity of Coronary artery disease in Acute coronary syndrome patient Dr. Ezhil Kumar. M (PG) Dept. of General Medicine Prof. Dr. M.K. Uthaya Sankar Dept. of General Medicine Prof. Dr. Ashida T.S. Dept. of Cardiology 13.03.2023
7. Identification of clusters of Type 2 Diabetes mellitus and its association with micro vascular complications- A rural hospital study Dr. A. Naveen (PG) Dept. of General Medicine Prof. Dr. S. Girija Dept. of General Medicine 03.03.2023
8. Serum Folic acid assay on long term Methotrexate therapy in Psoriatic patients- A case control study Dr. E. Ragul Raj (PG) Dept. of Dermatology Prof. Dr. K. Karthikeyan Dept. of Dermatology 10.10.2022
List of Completed projects
Sl. No Project Title PI Co- PI Year of project completion
1. A study of comparison of serum Keratin-18 level with child pugh’s score in assessing severity in patients with end stage alcoholic liver disease Dr. B. Vidhya (PG) Dept. of General Medicine Prof. Dr. M. K. Uthaya Sankar Dept. of General Medicine 2024
2. Predictive role of urinary biomarkers KIM-1 in early diagnosis of AKI in sepsis hypovolemia Dr. Abhinav (PG) Dept. of General Medicine Prof. Dr. Manokaran Dept. of General Medicine 2024
3. Serum Pentraxin-3 as a prognostic marker of sepsis in intensive care patients Dr. Jayasuriya (PG) Dept. of General Medicine Dr. J. Sathiyanarayanan Dept. of General Medicine 2024
4. A study on correlation of serum superoxide dismutase level with severity of alcoholic peripheral neuropathy Dr. Adrin Suthir (PG) Dept. of General Medicine Prof. Dr. M. K. Uthaya Sankar Dept. of General Medicine Dr. Balachandran M. Dept. of Neurology 2024
5. A study on serum cytokeratin 18 level in non-obese and non-alcoholic fatty liver disease in a tertiary setup Dr. Pravin Coumar (PG) Dept. of General Medicine Dr. G. Premkumar Dept. of General Medicine 2024
6. Autoimmune diabetes in patients with type 2 diabetes mellitus- a hospital based study Dr. Pooja N. U. (PG) Dept. of General Medicine Prof. Dr. S. Girija Dept. of General Medicine 2024
7. Study of comparison of high sensitive CRP to pre albumin ratio in acute coronary syndrome patients Dr. Aakash T. Ajith (PG) Dept. of General Medicine Prof. Dr. A.K. Badrinath Dept. of General Medicine 2024
8. Correlation between serum apelin levels with left ventricular mass in type 2 diabetes mellitus patients Dr. Deepsheeka. G. (PG) Dept. of General Medicine Prof. Dr. A. K. Badrinath Dept. of General Medicine 2024
9. Influence of SLC22A1 rs628031 and SLC47A1 rs2289669 genetic polymorphism on metformin response in South Indian patients with type 2 diabetes mellitus Dr. D. Anuranjani (PG) Dept. of Pharmacology Prof. Dr. S. Asmathulla Dept. of Biochemistry 2022
10. Association of genetic polymorphism of TCF7L2 gene among gestational diabetes mellitus subjects of South India Dr. S. Suganya (PG) Dept. of Biochemistry Prof. Dr. S. Asmathulla Dept. of Biochemistry 2022
11. Influence of MDR1 polymorphism rs1045642 and rs1128503 on Metformin response in South Indian patients with type 2 diabetes mellitus Dr. T. Vijaya Santhi (PG) Dept. of Pharmacology Prof. Dr. Nitya Dept. of Pharmacology 2022
12. To study VKORC1 gene polymorphism and CYP2C9 polymorphism status in patients on Acenocoumoral and its effect on therapeutic response Dr. S. Meghana (PG) Dept. of General Medicine Prof. Dr. S. Girija Dept. of General Medicine 2022
13. A study on genetic polymorphism of Interleukin-6 and Interleukin-10 and their association with cardiometabolic risk factors in Hashimoto’s Thyroiditis Mrs. R. Rajarajeswari Dept. of Biochemistry 2021
14. Antibiotic resistance pattern of Mycobacterium leprae among the patients of pre and post treatment tenure Dr. B. Manjula (PG) Dept. of Dermatology Dr. Hima Gopinath, Prof. Dr. K. Karthikeyan Dept. of Dermatology 2021
15. Evaluation of fine needle aspiration findings in Lymphadenitis – study in a tertiary care hospital Dr. Shanmugasundari (PG) Dept. of Pathology Prof. Dr. Erli Amel Ivan Dept. of Pathology 2021
16. Effect of Ethanolic extract of Moringa oleifera leaf on testis of Wistar rats exposed to 4G cell phone radiation. Mrs. R. Sudha Dept. of Anatomy 2021
17. Study of Vitamin-D Receptor gene polymorphism and to analyse the allele frequency among Chronic Kidney Disease patients in South Indian population. Dr. B. Ramya (PG) Dept. of Biochemistry Prof. Dr. S. Asmathulla Dept. of Biochemistry 2019
18. Prevalence and Molecular Characterization of HHV 6 and HHV 7 in patients with Pityriasis Rosea (PR) using polymerase chain reaction in a tertiary care hospital, Puducherry Dr. M. Rangaraj Dept. of Dermatology Prof. Dr. K. Karthikeyan Dept. of Dermatology 2019
19. Leptin gene polymorphism and pro-inflammatory cytokines profile among coronary artery disease patients with clustered cardiovascular diseases risk factors Prof. Dr. Ashida T.S Dept. of Cardiology Dr. R. Balamurugan CRL 2018
20. Molecular diagnosis of Prolidase deficiency Dr. David Polly (PG) Dept. of Dermatology Prof. Dr. K. Karthikeyan Dept. of Dermatology Prof. Dr. S. Asmathulla Dept. of Biochemistry 2018
21. Prevalence and Molecular characterization of Extended Spectrum Beta Lactamase (ESBL) producing bacteria in rural tertiary care hospital, Puducherry Dr. Sunil S. Shivekar Dept. of Microbiology Mr. M. Kaviraj CRL 2018
22. The study of prevalence and molecular characterization of Helicobacter pylori in dyspepsia Dr. S. Yogesh (PG) Dept. of General Medicine Prof. Dr. M. K. Uthaya Shankar Dept. of General Medicine Dr. Thirumal. P Dept. of Gasteroenterology 2018
23. Determination of helicobacter pylori virulence markers in clinical isolates by molecular typing and its association in pathogenesis Dr. R. Balamurugan CRL 2018
24. Oxidative stress, Lipid levels in fatty liver disease Ms. Jayashree (II-year MBBS) Ms. G. Agilandeswari Dept. of Biochemistry
25. Mineral content in urine of patients with urinary tract infection Mr. R. Rajprasath (M.Sc) Dept. of Biochemistry Prof. Dr. S. Asmathulla Dept. of Biochemistry 2015
26. Causative factors for elevated serum transaminases and their relation with oxidative stress in a tertiary hospital Ms. J. Yogapriya (M.Sc) Dept. of Biochemistry Prof. Dr. S. Asmathulla Dept. of Biochemistry 2015
27. Lipid peroxidation and antioxidants with lipid profile in pulmonary tuberculosis Ms. K. Elakiya (M.Sc) Dept. of Biochemistry Prof. Dr. S. Sumathi Dept. of Biochemistry 2015
28. gyrA ser83 mutation analysis in Escherchia Coli and Klebsiella pneumoniae in a tertiary care hospital, Puducherry Dr. G. Muthu CRL 2014
Publications
Sl. No Article
1. Madhavan H, Nobel MM, Rajalakshmi M, Kulkarni S, Thomas TRA, Shalini B, Mohan R. Sociodemographic features, serum urea, creatinine and blood urea nitrogen/creatinine ratio in chronic kidney disease patients–A record based retrospective study. Glob J Health Sci Res.2024;1-4.
2. Badrachalam R, Mani V, Kumar R, Shafiulla A. Vitamin D receptor (BsmI) gene polymorphism and allele frequency among chronic kidney disease patients in south Indian population. Bioinformation. 2023;19(4):380.
3. Manjula B, Gopinath H, Karthikeyan K. Resistance to anti-leprosy drugs: A cross-sectional study from a tertiary care hospital in Puducherry. Indian J Dermatol Venereol Leprol. 2023;89(3):456-8.
4. Mathayan M, Suresh A, Balamurugan R, Jayaraman S. Immune Stimulation effects of Pongamia pinnata extracts, an In vitro Analysis. Research J Pharm and Tech. 2020;13(1):308-12.
5. Dinesh D, Vidjai Vikram S, Balasubramanian S, Lazarus SP, Suresh Kumar K, Rajprasath R. A Study on the Effect of Lateral and Sitting Positions in Spinal Anesthesia for Cesarean Sections. Indian J Anesth Analg. 2020;7(1)(Part-I):33–40.
6. Murgaiyan R, Kaliyaperumal K, Rangasamy B. Prevalence and Molecular characterization of Human Herpes Virus 6 and 7 in patients with Pityriasis Rosea using Polymerase Chain reaction in a tertiary care hospital, Puducherry. Int. J Res Dermatol. 2019;5(4):728-731.
7. Ahamed AM, Kumar KS, Balasubramanian S, Lazarus SP, Vidjai Vikram S, Rajprasath R. A comparative study on the Endotracheal Tube cuff pressure changes between supine and Prone in patients undergoing Prone position surgeries. Indian J Anesth Analg. 2019;6(5):1599-603.
8. Ashida TS, Balamurugan R. Effect of Intracoronary Nicorandil compared to Nitroglycerin on Coronary Diameter and Hemodynamics following Balloon Dilatation during Elective PTCA. J Cardiovasc Med Surg. 2019;5(2):57-60.
9. Mangaiyarkarasi T, Gopal R, Shivekar SS, Kaviraj M, Balamurugan R. Analysis of epidemiological and demographic component of dengue in rural Puducherry – A hospital based study. Indian J Microbiol Res. 2019;6(3):225-228
10. Arulmani A, Kumar KS, Balasubramanian S, Lazarus SP, Sanmugapiriya K, Rajprasath R. Comparative Study of LMA Supreme versus I-gel in Patients Undergoing Laparoscopic Surgeries with Positive Pressure Ventilation. Indian J Anesth Analg. 2019;6(2):547-54.
11. Badrinath P, Balasubramanian S, Kumar KS, Lazarus SP, Rajprasath. Table Tilt versus Pelvic Tilt position for preventing Hemodynamic changes during Spinal Anaesthesia for Caesarean Section. Indian J Anesth Analg. 2019;6(2):399-406.
12. Mathaiyan M, Suresh A, Balamurugan R. Binding property of HIV p24 and Reverse transcriptase by chalcones from Pongamia pinnata seeds. Bioinformation. 2018;14(6): 279-84.
13. Karthikeyan K, Polly D, Asmathulla S, Balamurugan R, Kaviraj M. Topical proline therapy in prolidase deficiency. Clinical & Experimental Dermatology. 2019;1;44(3): 344
14. Jain SA, Das S, Subashini M, Mahadevan K. Determination of the proportion of refractive errors in patients with primary complaint of headache and the significance of refractive error correction in symptoms relief. Indian Journal of Clinical and Experimental Ophthalmology. 2018;4(2):258-62.
15. Ashida TS, Sriram R, Balamurugan R. Morning blood pressure surge and it’s relation to hypertensive and organ damage and severity of coronary artery disease. J Cardiovasc Med Surg. 2018;4(3):49-54.
16. Chaitra S, Das S, Subhashini M, Kaviraj M. A retrospective study of pterygium cases treated in a tertiary care hospital at Puducherry. Int J Ocul Oncol Oculoplasty. 2017; 3(4):273-6.
17. Das S, Vishwanandha NR, Sindhu, M, Subhashini M, Mahadevan K. A study on the angle of anterior chamber in relation to duration of diabetes mellitus and stages of diabetic retinopathy. Indian Journal of Clinical and Experimental Ophthalmology. 2017;3(3): 270-3.
18. Muthu G, Mangaiyarkarasi T, Vishnuprabu E, Sathishkumar S. Detection of gyrA ser83 mutation and parC gene amplification in E. coli and Klebsiella pneumoniae from tertiary care hospital, Puducherry. Int J Med Microbiol Trop Dis. 2017;3(4):167-70.
19. Julius A, Vedasendiyar R, Devakannan A, Rajaraman S, Rangasamy B, Saravanan V. Effect of Hesperidin for its Anti-Proliferative Activity on Liver Cancer and Cardio Vascular Diseases. Res J Pharm Technol. 2017;10(1):307–8.
20. Mohamedali S, Rafi N, Mahadevan K, Rangasamy G. Speciation of enterococci isolated from clinical specimens and determination of HLG and vancomycin resistance. J Evolution Med Dent Sci. 2017;6(36): 2973-6.
21. Anbarasi AC, Divya N, Subhashini M, Das S, Mahadevan K. Analysis of the effects of cataract surgery on corneal sensation variation after SICS and phacoemulsification. Indian Journal of Clinical and Experimental Ophthalmology. 2016;2(4): 287-9. 
22. Vidhya NP, Das S, Priyadarshini R, Subashini M, Mahadevan K. A comparative study on the intraocular pressure among diabetic and non-diabetic patients. Indian Journal of Clinical and Experimental Ophthalmology. 2016;2(4):378-80.
23. Rangasamy B, Ali SM, Mahadevan K, Maraudavanan R. A study on the rate of vacA genotypes of H.pylori in gastric biopsies obtained from patients with symptomatic upper GI disorders. Int J Curr Microbiol App Sci. 2016;5(12): 603-8.
24. Balamurugan R, Saleem M, Gopal R, Kaviraj M, Mangaiyarkarasi T, Shivekar SS, Kalaiselvan G. Prevalence of HIV seropositivity among the patients attending tertiary care hospital at Puducherry, India. Int J Res Med Sci. 2016;4(7):2725-7.
25. Balamurugan R, Shivekar SS, Gopal R, Kaviraj M, Mangaiyarkarasi T, Saleem M. Seroprevalence of Dengue in Rural Tertiary Care Hospital at Puducherry-A Retrospective Study. Int J Curr Microbiol App Sci. 2016;5(6): 130-4.
26. Balamurugan R, Gopal R, Saleem M, Kaviraj M, Shivekar SS, Mangaiyarkarasi T. Prevalence of hepatitis B surface antigen among patients attending a rural teaching hospital at Puducherry. Ind J Microbiol Res 2016:3(1):74-6.
27. Patil AS, Ramachandran M, Mohan RK, Mahadevan K, Rangasamy B. Histopathological Evaluation of Endoscopic Biopsies in patients with lesional gastrointestinal tract disorders. J Evolution Med Dent Sci. 2016;5(1):1-3.
28. Saleem M, Marudavanan R, Gopal R, Shivekar SS, Mangaiyarkarasi T. A comparative study of rapid urease test and dilute carbol fuchsin staining technique for diagnosis of Helicobacter pylori infection. Int J Res Med Sci. 2015;3(12):3608-10.
29. Ananthamurugan E, Saleem M, Gopal R, Shivekar SS, Kaviraj M, Balamurugan R. Prevalence of helicobacter pylori infection in patients with atrophic gastritis and role of dark field microscopy in diagnosis. J Evolution Med Dent Sci. 2015;4(93): 15873-5.
30. Arjun B, Annamalai A, Balamurugan R, Shivekar SS, Kaviraj M. A clinico-endoscopic study of upper GI disorders in rural population of Pondicherry. Int J Cur Res Rev. 2015;7(20): 37-40.
31. Saleem M, Subha TV, Balamurugan R, Kaviraj M, Gopal R. Bacterial Profile and Antimicrobial Susceptibility Pattern of Surgical Site Infections-A Retrospective Study. Indian J Appl Res. 2015;10(2):204-6.
32. Shivekar SS, Manikandan R, Balamurugan R, Kaviraj M, Suresh A. Incidence of MDR-Bacterial colonization in the surgical ward patients in rural tertiary care hospital, Puducherry. International Journal of Recent Trends in Science and Technology. 2015;16(2):478-81.
33. Kalaimathi SK, Muthu G, Manjula K. Antibacterial activity of Lobelia nicotianifolia against various bacterial strains. Int J Life Sci Pharma Res. 2015;5:19-25.
34. Muthu G, Iniyan GT, Shanmugam J, Mangaiyarkarasi T. Molecular detection of blaCTX-M and blaSHV genes in Escherichia coli and Klebsiella pneumoniae in a tertiary care hospital in Puducherry, India. International Journal of Pharma and Bio Sciences. 2014;5(1):689-96.

Academic Programs

Laboratory training of IV year MBBS students (2024)

Two sessions of laboratory training was conducted for 1Vth year MBBS students from 29.01.2024 – 12.02.2024 and 07.04.2024 – 21.04.2024. The program started with a brief introduction about CRL followed by a pre-test. Theoretical aspects of relevant biochemical and molecular biology techniques, basics of bioinformatics and a brief account of research methodology were included in the theory classes. Practical sessions were equally beneficial to instill knowledge on techniques like DNA isolation from blood and bacterial colonies, gene amplification and polymorphism detection by PCR-RFLP and separation of DNA by agarose gel electrophoresis. The program was concluded with submission of student’s log book, post-test and feedback.

Session 1: 29.01.2024 – 12.02.2024

Session 2: 07.04.2024 – 21.04.2024

Student Initiated Research

Session 1: 29.01.2024 – 12.02.2024
Session 2: 07.04.2024 – 21.04.2024

The program was aimed to develop research aptitude among medical students by selecting a research topic as a short term project after thorough discussion with the participants and faculty of CRL and HOD, Biochemistry. It was beneficial for the students in terms of learning the process of development and execution of a research problem. The students carried out retrospective studies on clinical parameters associated with a disease condition. The entire process helped the students to learn how to select a specific research topic, data collection, sorting and analysis, interpretation of results and report writing.

Completed projects
SI. NO. Topics Name of the student Course & Batch
1. A Clinical Audit on Postpartum Hemoglobin levels: A Study on Postpartum Anemia Jennifer John & Arsha A R IV MBBS (2020-2025)
2. A Clinical Audit on association between Platelet levels & Dengue fever in a tertiary care hospital Esther Lydia Festus & Lakshiya M R IV MBBS (2020-2025)
3. A Clinical Audit on Serum sodium, potassium and Troponin-I level in Myocardial Infarction Patients Menagadevi B & Harsheni M IV MBBS (2020-2025)
4. A Clinical Audit on the association of Urea and Creatinine levels and BUN-creatinine ratio in Chronic Kidney Disease patients Madhavan H & Melanie Mariyam Nobel IV MBBS (2020-2025)
5. A Clinical Audit on the Prevalence of Scabies in a tertiary care centre Supriya R A L IV MBBS (2020-2025)
Laboratory training of IV year MBBS students (2023)

Session 1: 20.02.2023 – 05.03.2023
Session 2: 06.03.2023 – 19.03.2023

Laboratory training session started with an introduction about CRL instrumentation facilities followed by a pre-test. Theory sessions included presentations on DNA isolation and separation techniques, molecular techniques to identify genes and alleles, basics of bioinformatics, biochemical separation techniques and introduction to research methodology. During the practical sessions, students participated in the isolation of DNA from whole blood and bacterial colonies, gene amplification and polymorphism detection by PCR-RFLP, separation of DNA by agarose gel electrophoresis and protein separation by serum electrophoresis. The training program concluded with the submission of logbook, post-test and feedback.

Events

Report on In house training program on ISO 15189: 2022

Date: 06.08.2024 to 09.08.2024 (1st batch)
20.08.2024  to 23.08.2024 (2nd  batch)
Venue: Lecture Hall II , SMVMCH
Name of the organizing department: Central Laboratory
Nature of Delegates: Lab Technician (58)
Name of the sponsoring agency:  Nil

Sessions Conducted:

Schedule
S.No Date Time Training Topic Resource faculties
1 6.8.24 & 20.8.24 1.45 pm to 4.00 pm Introduction to workshop Dr. V.Sriram
ISO Clause: 4.1-4.3
ISO Clause: 5.1-5.6
2 7.8.24 & 21.8.24 1.45 pm to 4.00 pm ISO Clause: 6.1-6.8 Dr.G.Revathy
3 8.8.24 & 22.8.24 1.45 pm to 4.00 pm ISO Clause: 7.1-7.8 Dr.M.Jeyakumar
4 9.8.24 & 23.8.24 1.45 pm to 4.00 pm ISO Clause: 8.1-8.9 Dr.T.Mangaiyarkarasi
World DNA Day (25.04.2024), Workshop on DNA Isolation and Separation

Date: 25.04.2024
Venue: Demo – 2, Department of Biochemistry & CRL
Time:  09.30 – 04.00 pm
Organizers: Central Research Laboratory & Department of Biochemistry

The program was aimed to provide hands-on experience and theoretical knowledge of the processes involved in DNA isolation and separation. Participants included 23 students of 2nd year DMLT and B. Sc MLT, School of Allied Health Sciences.

The event started with a brief introduction of the workshop by Dr. Kulkarni Sweta, Professor and HOD, Department of Biochemistry followed by distribution of files to the participants by faculty of Biochemistry and CRL. Further, the workshop began with a pre-test and presentation on ‘DNA Isolation and Applications’ by Dr. Tresa Remya A. T, Research Scientist, CRL followed by Presentation on “DNA Separation by agarose gel electrophoresis” by Ms. B. Shalini, Research Assistant, CRL.

Group wise hands on training on DNA Isolation from whole blood by salting out method was performed under the supervision of Dr. Tresa Remya A.T, Dr. S. Suganya, Mrs. K. Elakiya, Mr. R. Rajprasath, Ms. B. Shalini and Ms. J. Jasmine Manna Rani, and provided insights into DNA isolation procedure to the participants.

In the afternoon session, students carried out separation of the isolated DNA by agarose gel electrophoresis at CRL under the guidance of Dr. Tresa Remya A.T, Mr. R. Rajprasath and Ms. B. Shalini. Event concluded with post-test and feedback

Lab visit - 2023

Date: 06.09.2023
Venue: Biochemistry Department Demo – 2, CRL
Time:  01.00 – 04.30 pm
Organizers: Central Research Laboratory

One day Lab Visit for II B. Sc. (Hons.) Agriculture students of Sri Manakula Vinayagar Engineering College was organized by the Central Research Laboratory (CRL), Department of Biochemistry, SMVMCH. About 30 students participated in the lab visit. The program began with a brief introduction by Dr. Kulkarni Sweta, Professor and Head, Department of Biochemistry followed by presentations on ‘Polymerase chain reaction (PCR)’ and ‘DNA separation by agarose gel electrophoresis’ by Dr. Tresa Remya A. T, Research Scientist, CRL. Further, the students visited CRL instrumentation facility to know about the operation and applications of the instruments. Illustration of separation of PCR product by agarose gel electrophoresis was performed under with the supervision of Dr. Tresa Remya A. T and B. Shalini, Research Assistant, CRL. The students were enthusiastically participated in all the sessions and the organizers received positive responses for the event.

Workshop on DNA Isolation and Separation (28.04.2023)

Date: 28.04.2023
Venue: Demo – 2, Department of Biochemistry & CRL
Time: 09.30 – 04.00 pm
Organizers: Central Research Laboratory & Department of Biochemistry

The event started with a prayer and welcome address by Mr. Balakrishna Pai R and the formal inauguration of the workshop was done by the Deputy Director and Dean Dr. Kagne R. N in a lamp lighting ceremony. Dr. R. Gopal, Professor and Head, Department of Microiology & Dean, School of Allied Health Sciences and Dr. Kulkarni Sweta, Professor and Head, Department of Biochemistry felicitated the event.

The workshop started with a pre-questionnaire followed by two consecutive theory sessions on ‘DNA isolation and applications’ and ‘DNA separation by agarose gel electrophoresis’. The respective sessions were taken by the resource persons Dr. Tresa Remya A. T. And Mr. R. Rajprasath. Further, the practical sessions began at Biochemistry student’s lab with the supervision of two more resource persons Mrs. K. Elakiya, and Dr. S. Suganya. The participants successfully isolated DNA from whole Blood by salting out method and separated the DNA by agarose gel electrophoresis. The workshop offered training to 17 students from School of Allied Health Sciences. The students were enthusiastically participated in the workshop, the event concluded with post-questionnaire and the results were highly appreciable.

Workshop on DNA Isolation and Separation (17.02.2023)

Date: 17.02.2023
Venue: Demo – 2, Department of Biochemistry & CRL
Time: 09.30 – 03.45 pm
Organizers: Central Research Laboratory & Department of Biochemistry

The Workshop on ‘DNA Isolation and Separation’ was organized by the CRL in association with the Department of Biochemistry, SMVMCH. The workshop offered training to 26 students from II & III year Allied Health Sciences on DNA isolation from whole blood sample and further separation by agarose gel electrophoresis. The workshop started with a pre-questionnaire followed by two consecutive theory sessions on ‘DNA isolation and applications’ by Dr. Tresa Remya A. T, Research Scientist, CRL and ‘Agarose gel electrophoresis’ by Mr. R. Rajprasath, Research Assistant, CRL. An inauguration event was conducted after the theory sessions at Biochemistry Demo room-2 with the inaugural address by respected Director Dr. D. Rajagovindan and felicitation by Dr. R. Gopal, Professor and Head, Department of Microbiology and Dean, School of Allied Health Sciences.

Further, the practical sessions started at Biochemistry student’s lab, the participants successfully isolated DNA from whole blood and separated it by agarose gel electrophoresis. The students were enthusiastically participated the workshop, the event concluded with post-questionnaire and the results were highly appreciable.

Lab visit - 2022

Date: 05.08.2022
Venue:  Demo – 2, Department of Biochemistry & CRL
Time:  10.30 am – 04.00 pm
Organizers: Central Research Laboratory

The Lab Visit for Ist year B.Sc. (Hons.) Horticulture students of Sri Manakula Vinayagar Engineering College was organized by the Central Research Laboratory (CRL), Department of Biochemistry, SMVMCH. About 48 students participated in the lab visit. The event was conducted on 5th August 2022 from 10.30 am to 4 pm at CRL. The program started at 10.30 am with a brief introduction of instrumentation facility of CRL by Dr. S. Asmathulla, Professor and Head, Department of Biochemistry followed by presentation on ‘Introduction of Polymerase Chain Reaction & Agarose Gel Electrophoresis’ by Mr. M. Kaviraj, Research Associate, CRL. Practical sessions on ‘PCR technique’ and ‘DNA separation by agarose gel electrophoresis’ were conducted by M. Kaviraj and R. Rajprasath, Research Assistant, CRL. The students were enthusiastically participated in all the sessions and the organizers received positive responses for the event.

CME on cell culture and molecular techniques in research & diagnostic microbiology

Date: 30.03.2019
Venue: MEU Hall (Ground floor, College Block) & Cell culture lab, CRL
Time:  09.00 am – 04.30 pm
Organizers: Department of Microbiology & Central Research Laboratory

The event started with an introductory talk by Dr. R. Gopal, Professor and Head, Department of Microbiology followed by a presentation on ‘Introduction to cell culture techniques’ Dr. R. Balamurugan, Research Scientist, CRL. After the tea break, the guest of the event Dr. P. Shankar, Asst. Professor, Dept. of Microbiology, Government Medical College, Villupuram delivered a talk on ‘Application of Molecular Techniques in Diagnosis’. Another interesting presentation was done by Dr. R. Udhaya Sankar, Assistant Professor, Department of Microbiology on ‘Molecular epidemiological markers of infectious diseases’. During the afternoon session, demonstration of Peripheral Blood Mononuclear Cell (PBMC) isolation and handling of cell lines was carried out under the supervision of faculties at cell culture lab, CRL and event was successfully concluded.

Lab Safety

General safety precautions
  • Handle all samples as potentially infectious agents.
  • Handle all reagents with care and avoid contact with eye, mouth and skin.
  • Do not perform mouth pipetting.
  • Discard used reagents and samples as per disposal procedure.
Environment and safety control

The major modes of contamination when handling potentially infectious agents are:

  • Hand to mouth contact
  • Control: Usage of hand gloves and face mask.

Gloves protect the skin from hazardous materials which may come into contact with hands. However, precautions to be taken while removing the gloves and disposing to prevent contamination from sticking chemicals or infectious agents.

Face mask can be used in laboratory to prevent contamination from biological and chemical materials. Ensure that face masks must be laundered or disposed at the end of the day. Face masks used in a laboratory never be worn outside the lab.

  • Hand to eye contact

Control: Usage of hand gloves, safety glasses or goggles.

Safety glasses or goggles will protect eyes from physical or chemical harm.

  • Direct contact with superficial cuts, open wounds & other skin conditions that permit absorption into subcutaneous skin layer.

Control: Usage of lab coat, long pants and shoes.

Lab coats will protect clothes, superficial cuts, open wounds of skin from chemical or biological agents and flames in some cases. Long pants and shoes completely covering the top of the foot should be worn at all times when working in the lab.

  • Splashes, spills or aerosol contact with skin and eyes.

Control: Usage of lab coat, gloves and goggles

Waste disposal procedure

All laboratory wastes including infectious materials and other liquid and solid wastes will be segregated and discarded in biohazard waste collector bags based on the Bio-Medical Waste Management Rules, 2016.

biomedical waste management

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